STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB61925.1Acetyl coenzyme A synthase alpha subunit. (696 aa)    
Predicted Functional Partners:
GAB62271.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 0.850
GAB61926.1
Conserved hypothetical protein.
 
  
  0.818
GAB61924.1
Conserved hypothetical protein.
       0.757
GAB60991.1
2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
  
 0.692
GAB64259.1
Pyruvate synthase gamma/delta subunits.
    
 0.656
GAB60875.1
Ferredoxin.
   
 
  0.585
GAB64051.1
acetyl-CoA synthase.
    
 0.474
GAB64342.1
Acetolactate synthase large subunit.
   
  0.467
GAB63185.1
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.463
GAB63633.1
NADH dehydrogenase I subunit F.
     
 0.459
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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