STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB62198.1Putative glucose sorbosone dehydrogenase. (383 aa)    
Predicted Functional Partners:
GAB62271.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
    
  0.719
GAB61615.1
Hypothetical protein.
  
     0.667
GAB62197.1
Conserved hypothetical protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
       0.648
GAB61294.1
Conserved hypothetical protein.
  
     0.607
GAB62700.1
Conserved hypothetical protein.
  
  
  0.574
GAB63793.1
Conserved hypothetical protein.
  
   
 0.541
GAB64260.1
Glucokinase.
  
  
  0.531
GAB63585.1
Putative peptidase.
  
     0.524
GAB63803.1
Putative hydrolase.
 
     0.513
GAB63802.1
Putative UbiA prenyltransferase.
  
     0.508
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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