STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB62300.1Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1044 aa)    
Predicted Functional Partners:
GAB62299.1
Efflux transporter protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.981
GAB62610.1
Putative transporter protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.926
GAB64310.1
Conserved hypothetical protein.
 
 0.926
GAB64312.1
Putative multidrug efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.839
GAB62295.1
Efflux transporter protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.783
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
 
 0.776
GAB62238.1
Efflux transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.776
GAB61371.1
Cation efflux transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.773
GAB62297.1
ABC transporter permease component.
  
 
 0.725
GAB63266.1
Conserved hypothetical protein.
  
 0.718
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.