STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB62386.1Transcriptional regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (138 aa)    
Predicted Functional Partners:
GAB62385.1
Cobalt transporter protein.
 
   
 0.761
GAB61085.1
Transcriptional modulator; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.691
GAB63555.1
Hypothetical protein.
  
 
 0.691
GAB63568.1
Hypothetical protein.
  
 
 0.691
GAB62382.1
Cobalt ABC transporter ATP-binding component.
 
   
 0.652
GAB62271.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
     
 0.633
GAB62384.1
Conserved hypothetical protein.
       0.542
GAB62383.1
Cobalt ABC transporter permease component.
     
 0.538
GAB64051.1
acetyl-CoA synthase.
    
  0.423
GAB61104.1
biotin-[acetyl-CoA-carboxylase] ligase.
     
 0.401
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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