STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB62457.1Conserved hypothetical protein. (332 aa)    
Predicted Functional Partners:
GAB62459.1
Conserved hypothetical protein.
     0.917
GAB62455.1
Conserved hypothetical protein.
 
     0.905
GAB62454.1
Conserved hypothetical protein.
 
  
 0.859
GAB62460.1
Conserved hypothetical protein.
 
     0.833
GAB62461.1
Conserved hypothetical protein.
 
     0.795
GAB60893.1
Conserved hypothetical protein.
  
  
 0.781
GAB61781.1
Conserved hypothetical protein.
 
  
 0.744
GAB62456.1
Conserved hypothetical protein.
       0.732
GAB62453.1
ATPase.
 
 
 0.700
GAB62458.1
Conserved hypothetical protein.
 
    
0.675
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.