STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB62544.1Truncated DNA repair protein. (107 aa)    
Predicted Functional Partners:
GAB62545.1
Truncated DNA repair protein.
     0.962
GAB62546.1
Hypothetical protein.
       0.723
GAB62834.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.626
GAB61766.1
Cell shape determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.607
GAB61758.1
Putative phosphoribosyltransferase.
  
    0.566
GAB63383.1
DNA internalization-related competence protein.
 
  
 0.500
GAB62547.1
Conserved hypothetical protein.
       0.479
GAB64162.1
Diguanylate cyclase/phosphodiesterase.
  
    0.470
GAB62548.1
Hypothetical protein.
       0.468
GAB63846.1
Competence/damage-inducible protein; Belongs to the CinA family.
     
 0.426
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.