Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAB61996.1 | GAB62070.1 | KSU1_C0400 | KSU1_C0474 | Putative adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Putative ribokinase. | 0.725 |
GAB61996.1 | GAB62553.1 | KSU1_C0400 | KSU1_C0957 | Putative adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Conserved hypothetical protein; Belongs to the LOG family. | 0.467 |
GAB61996.1 | apt | KSU1_C0400 | KSU1_C0318 | Putative adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.840 |
GAB61996.1 | surE | KSU1_C0400 | KSU1_C0821 | Putative adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.631 |
GAB62070.1 | GAB61996.1 | KSU1_C0474 | KSU1_C0400 | Putative ribokinase. | Putative adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.725 |
GAB62070.1 | GAB62476.1 | KSU1_C0474 | KSU1_C0880 | Putative ribokinase. | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.648 |
GAB62070.1 | GAB62553.1 | KSU1_C0474 | KSU1_C0957 | Putative ribokinase. | Conserved hypothetical protein; Belongs to the LOG family. | 0.475 |
GAB62070.1 | apt | KSU1_C0474 | KSU1_C0318 | Putative ribokinase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.821 |
GAB62476.1 | GAB62070.1 | KSU1_C0880 | KSU1_C0474 | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Putative ribokinase. | 0.648 |
GAB62476.1 | GAB62553.1 | KSU1_C0880 | KSU1_C0957 | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Conserved hypothetical protein; Belongs to the LOG family. | 0.470 |
GAB62476.1 | GAB64062.1 | KSU1_C0880 | KSU1_D0753 | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Putative amidohydrolase. | 0.677 |
GAB62476.1 | apt | KSU1_C0880 | KSU1_C0318 | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.967 |
GAB62553.1 | GAB61996.1 | KSU1_C0957 | KSU1_C0400 | Conserved hypothetical protein; Belongs to the LOG family. | Putative adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.467 |
GAB62553.1 | GAB62070.1 | KSU1_C0957 | KSU1_C0474 | Conserved hypothetical protein; Belongs to the LOG family. | Putative ribokinase. | 0.475 |
GAB62553.1 | GAB62476.1 | KSU1_C0957 | KSU1_C0880 | Conserved hypothetical protein; Belongs to the LOG family. | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.470 |
GAB62553.1 | GAB62554.1 | KSU1_C0957 | KSU1_C0958 | Conserved hypothetical protein; Belongs to the LOG family. | Hypothetical protein. | 0.778 |
GAB62553.1 | GAB62555.1 | KSU1_C0957 | KSU1_C0959 | Conserved hypothetical protein; Belongs to the LOG family. | Succinate dehydrogenase iron-sulfur protein. | 0.515 |
GAB62553.1 | GAB64062.1 | KSU1_C0957 | KSU1_D0753 | Conserved hypothetical protein; Belongs to the LOG family. | Putative amidohydrolase. | 0.475 |
GAB62553.1 | apt | KSU1_C0957 | KSU1_C0318 | Conserved hypothetical protein; Belongs to the LOG family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.475 |
GAB62553.1 | ftsY | KSU1_C0957 | KSU1_C0960 | Conserved hypothetical protein; Belongs to the LOG family. | Cell division protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.518 |
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