STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB62653.1Hypothetical protein. (645 aa)    
Predicted Functional Partners:
GAB62654.1
Hypothetical protein.
       0.773
GAB62655.1
Hypothetical protein.
       0.773
GAB64074.1
Putative glycoside hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.685
GAB63140.1
Conserved hypothetical protein.
  
 
  0.629
GAB61939.1
Conserved hypothetical protein.
  
 0.610
GAB62652.1
Conserved hypothetical protein.
       0.574
GAB63159.1
Putative cell division protein.
    
   0.562
GAB62977.1
Conserved hypothetical protein.
    
   0.548
GAB62656.1
Hypothetical phage protein.
       0.496
GAB64249.1
Hypothetical protein.
    
 
 0.482
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.