STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB62686.1Conserved hypothetical protein. (87 aa)    
Predicted Functional Partners:
GAB61106.1
Chromosome partitioning protein.
  
 
 0.691
GAB62095.1
Cobyrinic acid a,c-diamide synthase.
  
 
 0.691
GAB63165.1
Chromosome segregation ATPase.
  
 
 0.691
GAB62684.1
Hypothetical protein.
       0.648
GAB62685.1
Hypothetical protein.
       0.648
GAB62683.1
Hypothetical protein.
       0.541
GAB61092.1
Homoserine dehydrogenase.
     
 0.490
GAB62116.1
Cysteine synthase.
    
 0.460
GAB63920.1
Cysteine synthase.
    
 0.460
GAB62687.1
Hypothetical protein.
       0.449
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.