STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB62724.1Putative phosphohydrolase. (663 aa)    
Predicted Functional Partners:
GAB63177.1
Two-component response regulator.
 
 0.978
GAB62865.1
Diguanylate cyclase.
 0.967
GAB64162.1
Diguanylate cyclase/phosphodiesterase.
 0.964
GAB63907.1
Two-component response regulator.
  
 0.961
GAB61928.1
Putative diguanylate cyclase.
 0.945
GAB63539.1
Two-component sensor kinase.
 
 0.944
GAB63672.1
Diguanylate cyclase/phosphodiesterase.
 
 0.938
GAB61189.1
Diguanylate cyclase/phosphodiesterase.
 
 0.936
GAB62129.1
Two-component sensor kinase.
   
 0.930
GAB61912.1
Two-component sensor kinase.
 
 0.912
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.