Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAB61572.1 | GAB63040.1 | KSU1_B0715 | KSU1_C1444 | DNA-binding protein. | Cobalamin synthesis protein. | 0.520 |
| GAB61998.1 | GAB63040.1 | KSU1_C0402 | KSU1_C1444 | phosphoribosyl-ATP diphosphatase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family. | Cobalamin synthesis protein. | 0.522 |
| GAB61998.1 | map | KSU1_C0402 | KSU1_C1229 | phosphoribosyl-ATP diphosphatase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.924 |
| GAB62098.1 | GAB63040.1 | KSU1_C0502 | KSU1_C1444 | Conserved hypothetical protein. | Cobalamin synthesis protein. | 0.521 |
| GAB63039.1 | GAB63040.1 | KSU1_C1443 | KSU1_C1444 | Ribonuclease. | Cobalamin synthesis protein. | 0.578 |
| GAB63040.1 | GAB61572.1 | KSU1_C1444 | KSU1_B0715 | Cobalamin synthesis protein. | DNA-binding protein. | 0.520 |
| GAB63040.1 | GAB61998.1 | KSU1_C1444 | KSU1_C0402 | Cobalamin synthesis protein. | phosphoribosyl-ATP diphosphatase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family. | 0.522 |
| GAB63040.1 | GAB62098.1 | KSU1_C1444 | KSU1_C0502 | Cobalamin synthesis protein. | Conserved hypothetical protein. | 0.521 |
| GAB63040.1 | GAB63039.1 | KSU1_C1444 | KSU1_C1443 | Cobalamin synthesis protein. | Ribonuclease. | 0.578 |
| GAB63040.1 | GAB63327.1 | KSU1_C1444 | KSU1_D0018 | Cobalamin synthesis protein. | Putative cobaltochelatase. | 0.571 |
| GAB63040.1 | GAB64092.1 | KSU1_C1444 | KSU1_D0783 | Cobalamin synthesis protein. | ABC transporter substrate binding component; Belongs to the bacterial solute-binding protein 9 family. | 0.720 |
| GAB63040.1 | map | KSU1_C1444 | KSU1_C1229 | Cobalamin synthesis protein. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.742 |
| GAB63040.1 | rpmB | KSU1_C1444 | KSU1_D0966 | Cobalamin synthesis protein. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.668 |
| GAB63040.1 | rpmG | KSU1_C1444 | KSU1_C1194 | Cobalamin synthesis protein. | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.565 |
| GAB63040.1 | rpsZ | KSU1_C1444 | KSU1_C1221 | Cobalamin synthesis protein. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.789 |
| GAB63327.1 | GAB63040.1 | KSU1_D0018 | KSU1_C1444 | Putative cobaltochelatase. | Cobalamin synthesis protein. | 0.571 |
| GAB64092.1 | GAB63040.1 | KSU1_D0783 | KSU1_C1444 | ABC transporter substrate binding component; Belongs to the bacterial solute-binding protein 9 family. | Cobalamin synthesis protein. | 0.720 |
| GAB64092.1 | rpmB | KSU1_D0783 | KSU1_D0966 | ABC transporter substrate binding component; Belongs to the bacterial solute-binding protein 9 family. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.609 |
| GAB64092.1 | rpsZ | KSU1_D0783 | KSU1_C1221 | ABC transporter substrate binding component; Belongs to the bacterial solute-binding protein 9 family. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.628 |
| map | GAB61998.1 | KSU1_C1229 | KSU1_C0402 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | phosphoribosyl-ATP diphosphatase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family. | 0.924 |
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