STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB63046.1Conserved hypothetical protein. (228 aa)    
Predicted Functional Partners:
GAB63045.1
Conserved hypothetical protein.
 
     0.951
GAB63047.1
Conserved hypothetical protein.
 
     0.869
GAB63048.1
Conserved hypothetical protein.
 
     0.849
GAB63043.1
Putative heme protein.
  
     0.683
GAB63038.1
Arylsulfatase.
  
     0.650
GAB63041.1
Sulfatase.
  
     0.613
GAB61689.1
Putative heme protein.
  
     0.589
GAB63037.1
Conserved hypothetical protein.
  
   
 0.558
GAB63042.1
Sulfatase.
  
     0.537
GAB61486.1
Fe-S cluster assembly protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.424
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.