Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAB61234.1 | GAB62096.1 | KSU1_B0377 | KSU1_C0500 | ATPase. | Cation efflux transporter. | 0.513 |
GAB61234.1 | GAB63060.1 | KSU1_B0377 | KSU1_C1464 | ATPase. | Putative cobalt/zinc/cadmium cation efflux pump; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.571 |
GAB61234.1 | GAB63146.1 | KSU1_B0377 | KSU1_C1550 | ATPase. | Putative iron dependent repressor. | 0.580 |
GAB61234.1 | GAB63255.1 | KSU1_B0377 | KSU1_C1659 | ATPase. | Conserved hypothetical protein. | 0.991 |
GAB61234.1 | GAB63321.1 | KSU1_B0377 | KSU1_D0012 | ATPase. | Two-component sensor kinase. | 0.475 |
GAB62096.1 | GAB61234.1 | KSU1_C0500 | KSU1_B0377 | Cation efflux transporter. | ATPase. | 0.513 |
GAB62096.1 | GAB63060.1 | KSU1_C0500 | KSU1_C1464 | Cation efflux transporter. | Putative cobalt/zinc/cadmium cation efflux pump; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.552 |
GAB62096.1 | GAB63146.1 | KSU1_C0500 | KSU1_C1550 | Cation efflux transporter. | Putative iron dependent repressor. | 0.499 |
GAB62096.1 | GAB63255.1 | KSU1_C0500 | KSU1_C1659 | Cation efflux transporter. | Conserved hypothetical protein. | 0.513 |
GAB63060.1 | GAB61234.1 | KSU1_C1464 | KSU1_B0377 | Putative cobalt/zinc/cadmium cation efflux pump; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | ATPase. | 0.571 |
GAB63060.1 | GAB62096.1 | KSU1_C1464 | KSU1_C0500 | Putative cobalt/zinc/cadmium cation efflux pump; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Cation efflux transporter. | 0.552 |
GAB63060.1 | GAB63146.1 | KSU1_C1464 | KSU1_C1550 | Putative cobalt/zinc/cadmium cation efflux pump; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Putative iron dependent repressor. | 0.514 |
GAB63060.1 | GAB63255.1 | KSU1_C1464 | KSU1_C1659 | Putative cobalt/zinc/cadmium cation efflux pump; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Conserved hypothetical protein. | 0.524 |
GAB63060.1 | GAB63321.1 | KSU1_C1464 | KSU1_D0012 | Putative cobalt/zinc/cadmium cation efflux pump; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Two-component sensor kinase. | 0.471 |
GAB63060.1 | mdh | KSU1_C1464 | KSU1_D0122 | Putative cobalt/zinc/cadmium cation efflux pump; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.857 |
GAB63146.1 | GAB61234.1 | KSU1_C1550 | KSU1_B0377 | Putative iron dependent repressor. | ATPase. | 0.580 |
GAB63146.1 | GAB62096.1 | KSU1_C1550 | KSU1_C0500 | Putative iron dependent repressor. | Cation efflux transporter. | 0.499 |
GAB63146.1 | GAB63060.1 | KSU1_C1550 | KSU1_C1464 | Putative iron dependent repressor. | Putative cobalt/zinc/cadmium cation efflux pump; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.514 |
GAB63146.1 | GAB63255.1 | KSU1_C1550 | KSU1_C1659 | Putative iron dependent repressor. | Conserved hypothetical protein. | 0.594 |
GAB63255.1 | GAB61234.1 | KSU1_C1659 | KSU1_B0377 | Conserved hypothetical protein. | ATPase. | 0.991 |
page 1 of 2