STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB63122.1Hypothetical protein. (559 aa)    
Predicted Functional Partners:
GAB63121.1
Hypothetical protein.
       0.773
GAB64198.1
Putative secretion pathway protein; Belongs to the bacterial secretin family.
  
     0.773
GAB61482.1
Secretory pathway protein.
  
    0.772
GAB63123.1
Hypothetical protein.
       0.741
GAB61483.1
Secretory pathway protein.
  
  
 0.698
GAB63999.1
Conserved hypothetical protein.
 
  
 0.686
GAB63378.1
Conserved hypothetical protein; Belongs to the bacterial secretin family.
  
  
  0.683
GAB64000.1
Secretory pathway protein.
 
   
 0.681
GAB64188.1
Type IV fimbrial assembly protein PilB.
  
  
 0.656
GAB63051.1
Type IV fimbrial assembly protein.
  
  
 0.632
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.