STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB63165.1Chromosome segregation ATPase. (255 aa)    
Predicted Functional Partners:
GAB61383.1
Chromosome partitioning protein; Belongs to the ParB family.
 
 0.951
GAB62686.1
Conserved hypothetical protein.
  
 
 0.691
GAB62048.1
TonB-dependent receptor.
    
   0.590
GAB63329.1
Conserved hypothetical protein.
    
   0.590
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.496
dnaA-2
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.494
GAB63166.1
Conserved hypothetical protein.
       0.472
GAB63168.1
MCP methyltransferase/methylesterase.
  
  
 0.438
GAB63307.1
Putative transferase.
  
  
 0.437
GAB63159.1
Putative cell division protein.
  
  
 0.431
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.