STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB63259.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
GAB63248.1
Conserved hypothetical protein.
 
     0.800
GAB63221.1
Hypothetical protein.
  
     0.774
GAB63246.1
Hypothetical protein.
  
     0.774
GAB63260.1
Glycoside hydrolase.
       0.773
GAB62973.1
Hypothetical protein.
  
     0.768
GAB62250.1
Conserved hypothetical protein.
    
  0.729
GAB63261.1
Putative heme protein.
       0.651
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.608
GAB63539.1
Two-component sensor kinase.
    
  0.460
GAB60853.1
Two-component sensor kinase.
    
  0.442
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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