STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB63468.1Conserved hypothetical protein. (611 aa)    
Predicted Functional Partners:
GAB61912.1
Two-component sensor kinase.
   
 0.761
GAB63672.1
Diguanylate cyclase/phosphodiesterase.
   
 
 0.750
GAB62491.1
Two-component sensor kinase.
    
 0.727
GAB61016.1
Putative two-component sensor kinase.
  
 
 0.720
GAB64162.1
Diguanylate cyclase/phosphodiesterase.
   
 
 0.696
GAB61598.1
Lipopolysaccharide biosynthesis protein.
  
 
 
 0.687
GAB61878.1
Two-component sensor kinase.
   
 0.687
GAB63168.1
MCP methyltransferase/methylesterase.
 
 
 0.676
GAB63469.1
Hypothetical protein.
       0.671
GAB63321.1
Two-component sensor kinase.
  
 0.666
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.