STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB63609.1Putative methyltransferase. (277 aa)    
Predicted Functional Partners:
GAB63611.1
Asparagine synthase.
  
    0.775
GAB63610.1
Polysaccharide biosynthesis protein.
       0.773
GAB61038.1
2-acyl-glycerophospho-ethanolamine acyltransferase.
    
 0.677
GAB63633.1
NADH dehydrogenase I subunit F.
     
 0.552
GAB61557.1
Prenyltransferase; Belongs to the UbiA prenyltransferase family.
   
 0.543
GAB63607.1
Hypothetical protein.
   
  0.490
GAB63608.1
Putative methyltransferase.
       0.472
speH
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
     
 0.469
GAB63612.1
Oxidoreductase.
       0.459
GAB63605.1
Conserved hypothetical protein.
       0.450
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.