STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB63680.1Cytochrome b6. (121 aa)    
Predicted Functional Partners:
GAB63679.1
Conserved hypothetical protein.
       0.789
GAB63681.1
Conserved hypothetical protein.
       0.689
GAB61615.1
Hypothetical protein.
  
     0.685
GAB62019.1
Hypothetical protein.
  
     0.606
GAB61294.1
Conserved hypothetical protein.
  
     0.582
GAB63682.1
Conserved hypothetical protein.
 
     0.560
GAB62229.1
Methyltransferase.
  
     0.464
GAB61225.1
Nucleoside diphosphate kinase.
  
  
  0.461
GAB63678.1
Conserved hypothetical protein.
       0.448
GAB63770.1
Ammonium transporter protein.
  
     0.438
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.