STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB63828.1Conserved hypothetical protein. (95 aa)    
Predicted Functional Partners:
GAB63829.1
Putative peptidase.
       0.768
GAB61525.1
Putative RNA polymerase alpha subunit.
  
     0.724
GAB60856.1
Putative cytochrome c-554.
  
 
  0.700
GAB62231.1
Conserved hypothetical protein.
  
     0.673
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.658
GAB62103.1
Conserved hypothetical protein.
  
     0.628
GAB62104.1
Conserved hypothetical protein.
  
     0.618
GAB64343.1
Stage V sporulation protein; Belongs to the SpoVG family.
  
    0.615
GAB62604.1
Conserved hypothetical protein.
  
     0.603
GAB61709.1
Conserved hypothetical protein.
  
     0.577
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.