STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB63929.1Conserved hypothetical protein. (355 aa)    
Predicted Functional Partners:
lpxD-2
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
       0.603
GAB63928.1
Conserved hypothetical protein.
       0.603
GAB64148.1
Conserved hypothetical protein; Belongs to the UPF0312 family.
  
     0.593
GAB63930.1
Conserved hypothetical protein.
       0.476
GAB61362.1
Conserved hypothetical protein.
  
     0.469
GAB63926.1
Conserved hypothetical protein.
       0.440
GAB63658.1
Conserved hypothetical protein.
  
     0.420
GAB61918.1
Conserved hypothetical protein.
  
     0.414
GAB61919.1
Conserved hypothetical protein.
  
     0.404
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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