STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB64051.1acetyl-CoA synthase. (576 aa)    
Predicted Functional Partners:
GAB62271.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 0.905
GAB61038.1
2-acyl-glycerophospho-ethanolamine acyltransferase.
 
0.897
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
    
 0.861
GAB61571.1
long-chain-fatty-acid--CoA ligase.
 
0.844
GAB63535.1
CO dehydrogenase/acetyl-CoA synthase alpha subunit.
   
 
 0.814
GAB63185.1
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.799
GAB61800.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.775
GAB62524.1
Putative ferredoxin.
  
 0.760
GAB63984.1
Aldehyde dehydrogenase.
  
 0.760
GAB60991.1
2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
  
 
 0.753
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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