STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB64134.1Oxidoreductase. (401 aa)    
Predicted Functional Partners:
GAB61288.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.903
GAB62088.1
Pyridine nucleotide-disulphide oxidoreductase.
   
 0.708
GAB61245.1
NADPH-dependent FMN reductase.
 
 
  0.612
GAB64135.1
Hypothetical protein.
       0.542
GAB64136.1
NADH dehydrogenase.
       0.542
GAB63490.1
Two-component sensor kinase.
    
 0.541
GAB62108.1
Hypothetical protein.
 
 
 0.538
GAB63948.1
Putative rubredoxin.
 
 
 0.530
GAB63369.1
Putative rubredoxin.
 
 
 0.524
GAB64137.1
NADH dehydrogenase.
       0.522
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.