STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB64184.1Conserved hypothetical protein. (181 aa)    
Predicted Functional Partners:
GAB64185.1
Lipoprotein.
 
     0.809
GAB64240.1
Conserved hypothetical protein.
 
     0.775
GAB62080.1
Conserved hypothetical protein.
  
     0.605
GAB63691.1
Conserved hypothetical protein.
  
     0.570
GAB63671.1
Conserved hypothetical protein.
  
     0.480
GAB64186.1
Conserved hypothetical protein.
       0.469
GAB63857.1
ABC transporter permease component.
  
     0.444
GAB60945.1
Putative transposase.
  
     0.437
GAB63859.1
Conserved hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.406
GAB61634.1
Conserved hypothetical protein; Belongs to the UPF0753 family.
  
     0.403
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.