STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB64189.1Type IV fimbrial assembly protein PilB. (545 aa)    
Predicted Functional Partners:
GAB64187.1
Type IV fimbrial assembly protein PilC.
 
 0.981
GAB63999.1
Conserved hypothetical protein.
  
 
 0.973
GAB63053.1
Type IV fimbrial assembly protein.
 
 
 0.920
GAB63996.1
Conserved hypothetical protein.
 
 
 0.920
GAB64188.1
Type IV fimbrial assembly protein PilB.
 
    
0.803
GAB60953.1
Putative peptidase.
 
 
 0.795
GAB61482.1
Secretory pathway protein.
  
  0.639
GAB64198.1
Putative secretion pathway protein; Belongs to the bacterial secretin family.
  
  
 0.636
GAB62929.1
Conserved hypothetical protein.
  
  0.610
GAB62178.1
Hypothetical protein; Belongs to the bacterial secretin family.
  
  
 0.605
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
Server load: low (28%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.