STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB64209.1Conserved hypothetical protein. (464 aa)    
Predicted Functional Partners:
GAB64211.1
NAD-dependent epimerase/dehydratase.
 
  
  0.859
GAB64210.1
Hypothetical protein.
  
    0.763
GAB61660.1
Conserved hypothetical protein.
  
    0.663
GAB61541.1
Conserved hypothetical protein.
  
     0.640
GAB60829.1
Glycosyltransferase.
  
     0.607
GAB64212.1
Putative oxidoreductase.
 
     0.605
GAB61661.1
Squalene-hopene cyclase.
  
   
 0.603
GAB63504.1
Conserved hypothetical protein.
  
     0.566
GAB64208.1
Putative glycosyltransferase.
       0.485
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.