Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAB61056.1 | GAB63749.1 | KSU1_B0199 | KSU1_D0440 | Putative heme protein. | Putative hydrazine hydrolase B subunit. | 0.742 |
GAB61056.1 | GAB63815.1 | KSU1_B0199 | KSU1_D0506 | Putative heme protein. | Conserved hypothetical protein. | 0.464 |
GAB61056.1 | GAB64321.1 | KSU1_B0199 | KSU1_D1012 | Putative heme protein. | Putative lipoprotein. | 0.555 |
GAB63749.1 | GAB61056.1 | KSU1_D0440 | KSU1_B0199 | Putative hydrazine hydrolase B subunit. | Putative heme protein. | 0.742 |
GAB63749.1 | GAB63815.1 | KSU1_D0440 | KSU1_D0506 | Putative hydrazine hydrolase B subunit. | Conserved hypothetical protein. | 0.477 |
GAB63749.1 | GAB64321.1 | KSU1_D0440 | KSU1_D1012 | Putative hydrazine hydrolase B subunit. | Putative lipoprotein. | 0.562 |
GAB63815.1 | GAB61056.1 | KSU1_D0506 | KSU1_B0199 | Conserved hypothetical protein. | Putative heme protein. | 0.464 |
GAB63815.1 | GAB63749.1 | KSU1_D0506 | KSU1_D0440 | Conserved hypothetical protein. | Putative hydrazine hydrolase B subunit. | 0.477 |
GAB63815.1 | GAB64321.1 | KSU1_D0506 | KSU1_D1012 | Conserved hypothetical protein. | Putative lipoprotein. | 0.531 |
GAB64321.1 | GAB61056.1 | KSU1_D1012 | KSU1_B0199 | Putative lipoprotein. | Putative heme protein. | 0.555 |
GAB64321.1 | GAB63749.1 | KSU1_D1012 | KSU1_D0440 | Putative lipoprotein. | Putative hydrazine hydrolase B subunit. | 0.562 |
GAB64321.1 | GAB63815.1 | KSU1_D1012 | KSU1_D0506 | Putative lipoprotein. | Conserved hypothetical protein. | 0.531 |