STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB64336.14Fe-4S ferredoxin iron-sulfur binding domain protein. (357 aa)    
Predicted Functional Partners:
GAB63633.1
NADH dehydrogenase I subunit F.
    
 0.791
GAB62271.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
  0.771
GAB64287.1
Conserved hypothetical protein.
  
  
  0.755
GAB64136.1
NADH dehydrogenase.
    
 0.740
GAB61552.1
NAD(P) oxidoreductase.
    
 0.712
GAB63724.1
Conserved hypothetical protein.
  
  
  0.638
GAB60991.1
2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
  
 
  0.633
GAB60890.1
Putative glutamate synthase.
  
  
  0.627
GAB64259.1
Pyruvate synthase gamma/delta subunits.
    
  0.604
GAB61249.1
4Fe-4S ferredoxin iron-sulfur binding subunit.
    
  0.603
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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