STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB64351.1ABC transporter permease component. (279 aa)    
Predicted Functional Partners:
GAB64352.1
ABC transporter ATP-binding component.
 
 0.999
GAB64067.1
Lipopolysaccharide biosynthesis protein.
  
 
 0.954
GAB64077.1
Glycosyltransferase.
 
  
 0.703
GAB61611.1
Putative glycosyl transferase.
 
  
 0.676
GAB64156.1
Conserved hypothetical protein.
    
  0.650
GAB64157.1
Conserved hypothetical protein.
    
  0.650
GAB63388.1
Putative glycosyltransferase.
  
  
 0.632
GAB64290.1
Conserved hypothetical protein.
  
  
 0.561
GAB64353.1
Putative glycosyltransferase.
 
  
 0.552
GAB60824.1
Polysaccharide export outer membrane protein.
  
  
 0.544
Your Current Organism:
Jettenia caeni
NCBI taxonomy Id: 247490
Other names: C. Jettenia caeni, Candidatus Jettenia caeni, planctomycete KSU-1, strain KSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.