Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAW29617.1 | EAW31243.1 | GP2143_12416 | GP2143_03943 | Phosphoribosylaminoimidazole carboxylase ATPase subunit; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | 0.567 |
EAW29617.1 | EAW31896.1 | GP2143_12416 | GP2143_05580 | Phosphoribosylaminoimidazole carboxylase ATPase subunit; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | Hypothetical protein. | 0.695 |
EAW29700.1 | EAW30023.1 | GP2143_12211 | GP2143_01220 | COG0825 Acetyl-CoA carboxylase alpha subunit. | Hypothetical protein. | 0.604 |
EAW29700.1 | EAW31243.1 | GP2143_12211 | GP2143_03943 | COG0825 Acetyl-CoA carboxylase alpha subunit. | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | 0.893 |
EAW29700.1 | EAW31371.1 | GP2143_12211 | GP2143_07474 | COG0825 Acetyl-CoA carboxylase alpha subunit. | 2-ketoglutarate: NADP oxidoreductase, alpha subunit; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit. | 0.950 |
EAW29700.1 | glcB | GP2143_12211 | GP2143_11559 | COG0825 Acetyl-CoA carboxylase alpha subunit. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.918 |
EAW30023.1 | EAW29700.1 | GP2143_01220 | GP2143_12211 | Hypothetical protein. | COG0825 Acetyl-CoA carboxylase alpha subunit. | 0.604 |
EAW30023.1 | EAW31243.1 | GP2143_01220 | GP2143_03943 | Hypothetical protein. | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | 0.408 |
EAW30023.1 | glcB | GP2143_01220 | GP2143_11559 | Hypothetical protein. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.494 |
EAW31243.1 | EAW29617.1 | GP2143_03943 | GP2143_12416 | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | Phosphoribosylaminoimidazole carboxylase ATPase subunit; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | 0.567 |
EAW31243.1 | EAW29700.1 | GP2143_03943 | GP2143_12211 | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | COG0825 Acetyl-CoA carboxylase alpha subunit. | 0.893 |
EAW31243.1 | EAW30023.1 | GP2143_03943 | GP2143_01220 | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | Hypothetical protein. | 0.408 |
EAW31243.1 | EAW31371.1 | GP2143_03943 | GP2143_07474 | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | 2-ketoglutarate: NADP oxidoreductase, alpha subunit; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit. | 0.550 |
EAW31243.1 | EAW31896.1 | GP2143_03943 | GP2143_05580 | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | Hypothetical protein. | 0.567 |
EAW31243.1 | glcB | GP2143_03943 | GP2143_11559 | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.410 |
EAW31371.1 | EAW29700.1 | GP2143_07474 | GP2143_12211 | 2-ketoglutarate: NADP oxidoreductase, alpha subunit; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit. | COG0825 Acetyl-CoA carboxylase alpha subunit. | 0.950 |
EAW31371.1 | EAW31243.1 | GP2143_07474 | GP2143_03943 | 2-ketoglutarate: NADP oxidoreductase, alpha subunit; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit. | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | 0.550 |
EAW31371.1 | glcB | GP2143_07474 | GP2143_11559 | 2-ketoglutarate: NADP oxidoreductase, alpha subunit; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.871 |
EAW31896.1 | EAW29617.1 | GP2143_05580 | GP2143_12416 | Hypothetical protein. | Phosphoribosylaminoimidazole carboxylase ATPase subunit; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. | 0.695 |
EAW31896.1 | EAW31243.1 | GP2143_05580 | GP2143_03943 | Hypothetical protein. | Putative cyclase; COG1878 Predicted metal-dependent hydrolase. | 0.567 |
page 1 of 2