STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAW31943.1COG3279 Response regulator of the LytR/AlgR family. (271 aa)    
Predicted Functional Partners:
EAW31942.1
Sensor histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 0.984
EAW33144.1
Putative transmembrane sensor histidine kinase transcription regulator protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.879
EAW32752.1
Alginate biosynthesis protein AlgZ/FimS; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.865
EAW32960.1
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
    
 0.633
EAW31944.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.605
EAW31429.1
Probable two-component sensor; COG0642 Signal transduction histidine kinase.
 
  
 0.597
EAW30784.1
Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
 
  
 0.585
EAW32681.1
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
  
 0.583
EAW30787.1
Signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
  
 0.575
EAW31941.1
Glucose/galactose transporter family protein; COG0738 Fucose permease.
 
     0.542
Your Current Organism:
gamma proteobacterium HTCC2143
NCBI taxonomy Id: 247633
Other names: Gammaproteobacteria sp. HTCC2143, m. gamma proteobacterium HTCC2143, marine gamma proteobacterium HTCC2143
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