STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAW32179.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (962 aa)    
Predicted Functional Partners:
EAW32199.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.776
EAW30181.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.722
EAW31971.1
TonB-dependent receptor, putative; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.714
EAW32899.1
Putative TonB2 protein; COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
   0.677
EAW32897.1
Putative TonB system-dependent transport protein; COG0811 Biopolymer transport proteins.
  
    0.641
EAW32896.1
MotA/TolQ/ExbB proton channel family protein; COG1196 Chromosome segregation ATPases.
  
    0.602
EAW31004.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.589
EAW32180.1
Hypothetical protein.
       0.572
EAW31944.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.571
EAW32898.1
COG0848 Biopolymer transport protein.
  
    0.529
Your Current Organism:
gamma proteobacterium HTCC2143
NCBI taxonomy Id: 247633
Other names: Gammaproteobacteria sp. HTCC2143, m. gamma proteobacterium HTCC2143, marine gamma proteobacterium HTCC2143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.