Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB76772.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
EEB76767.1
Putative phosphotransferase enzyme family protein; [M] COG0510 Predicted choline kinase involved in LPS biosynthesis.
       0.773
EEB76774.1
Hypothetical protein.
       0.773
EEB76769.1
Acyl-CoA dehydrogenase, C-terminal domain, putative; [I] COG1960 Acyl-CoA dehydrogenases.
       0.697
EEB76768.1
Hypothetical protein; [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
       0.561
EEB76777.1
Sulfatase, putative; [P] COG3119 Arylsulfatase A and related enzymes.
       0.561
EEB76771.1
Oxidoreductase, short chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.421
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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