STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB78710.1Hypothetical protein. (314 aa)    
Predicted Functional Partners:
EEB78488.1
Hypothetical protein; [R] COG4188 Predicted dienelactone hydrolase.
 
     0.699
EEB78667.1
Hydrolase, alpha/beta fold family, putative; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.588
EEB78651.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.515
EEB78584.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.499
EEB78616.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.441
EEB78612.1
Acyl-CoA dehydrogenase, C-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.
  
     0.440
EEB80421.1
Transcriptional regulator, TetR family.
  
     0.435
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.