STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB78446.1Mannitol dehydrogenase rossman domain family; [G] COG0246 Mannitol-1-phosphate/altronate dehydrogenases. (476 aa)    
Predicted Functional Partners:
uxaC
[G] COG1904 Glucuronate isomerase.
 
 
 0.995
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.988
EEB76985.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; [M] COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.873
EEB78462.1
FCD domain protein; [K] COG1802 Transcriptional regulators.
 
   
 0.862
EEB78409.1
Hypothetical protein; [R] COG0673 Predicted dehydrogenases and related proteins.
 
   
 0.855
EEB77597.1
Kinase, pfkB family; [G] COG0524 Sugar kinases, ribokinase family.
 
  
 0.841
EEB78383.1
Oxidoreductase family, NAD-binding Rossmann fold protein; [R] COG0673 Predicted dehydrogenases and related proteins.
 
   
 0.820
EEB78356.1
Hypothetical protein; [P] COG1914 Mn2+ and Fe2+ transporters of the NRAMP family.
       0.768
EEB76934.1
Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.690
pgi
[G] COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.636
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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