STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB79004.1[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family. (210 aa)    
Predicted Functional Partners:
EEB78144.1
Dihydroorotate dehydrogenase family protein; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
 0.896
nuoC
Putative NADH dehydrogenase, subunit C subfamily; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.870
EEB79953.1
4Fe-4S binding domain protein; [O] COG0492 Thioredoxin reductase.
   
 0.786
EEB79234.1
Hypothetical protein.
       0.781
EEB78543.1
Putative 2Fe-2S iron-sulfur cluster binding domain protein; [C] COG0633 Ferredoxin.
  
 0.725
fdx
Ferredoxin, 2Fe-2S type, ISC system; [C] COG0633 Ferredoxin.
  
 0.725
EEB78946.1
[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
     0.699
EEB77743.1
Glutamate synthase domain family protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C.
    
 0.656
EEB79175.1
Oxidoreductase, FAD/FMN-binding family; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
    
 0.644
EEB80192.1
Oxidoreductase, FAD/FMN-binding family; [C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
    
 0.644
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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