Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rnfGElectron transport complex, RnfABCDGE type, G subunit subfamily; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. (215 aa)    
Predicted Functional Partners:
rnfE
Electron transport complex, RnfABCDGE type, E subunit subfamily; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.999
rnfD
Electron transport complex, RnfABCDGE type, D subunit subfamily; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
 
 0.998
rnfC
Electron transport complex, RnfABCDGE type, C subunit subfamily, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
 
 
 0.998
rnfA
Electron transport complex, RnfABCDGE type, A subunit subfamily; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.993
rnfB
Electron transport complex, RnfABCDGE type, B subunit subfamily; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.991
EEB77314.1
[S] COG2914 Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family.
 
 
 0.929
nqrB
NADH:ubiquinone oxidoreductase, B subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
  
 
 0.909
EEB79184.1
[T] COG3086 Positive regulator of sigma E activity.
 
     0.755
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
  
  
 0.753
EEB79953.1
4Fe-4S binding domain protein; [O] COG0492 Thioredoxin reductase.
   
 
 0.702
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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