STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB79090.1ABC transporter, permease protein, putative; [P] COG1178 ABC-type Fe3+ transport system, permease component. (269 aa)    
Predicted Functional Partners:
EEB79118.1
Bacterial extracellular solute-binding protein, putative; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.999
EEB79154.1
ABC transporter, permease protein, putative; [P] COG1178 ABC-type Fe3+ transport system, permease component.
 
0.998
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.996
speB_1
Agmatinase; [E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
  
 0.785
EEB78999.1
Transcriptional regulator, TetR family; [K] COG1309 Transcriptional regulator.
       0.773
EEB77172.1
Caspase domain protein; [R] COG4249 Uncharacterized protein containing caspase domain.
    
 0.590
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
 0.522
EEB78985.1
FAD dependent oxidoreductase domain protein; [Q] COG1233 Phytoene dehydrogenase and related proteins.
       0.516
EEB79160.1
[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
       0.516
EEB79198.1
FAD dependent oxidoreductase, putative; [Q] COG1233 Phytoene dehydrogenase and related proteins.
       0.516
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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