Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEB77809.1 | EEB78846.1 | GPB2148_919 | GPB2148_2054 | Hypothetical protein; [D] COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation. | Hypothetical protein. | 0.558 |
EEB78256.1 | EEB78846.1 | GPB2148_882 | GPB2148_2054 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Hypothetical protein. | 0.605 |
EEB78256.1 | EEB79984.1 | GPB2148_882 | GPB2148_3833 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Putative rieske (2Fe-2S) domain protein; [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.617 |
EEB78846.1 | EEB77809.1 | GPB2148_2054 | GPB2148_919 | Hypothetical protein. | Hypothetical protein; [D] COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation. | 0.558 |
EEB78846.1 | EEB78256.1 | GPB2148_2054 | GPB2148_882 | Hypothetical protein. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.605 |
EEB78846.1 | EEB79280.1 | GPB2148_2054 | GPB2148_2210 | Hypothetical protein. | Hypothetical protein. | 0.562 |
EEB78846.1 | EEB79984.1 | GPB2148_2054 | GPB2148_3833 | Hypothetical protein. | Putative rieske (2Fe-2S) domain protein; [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.449 |
EEB78846.1 | EEB80539.1 | GPB2148_2054 | GPB2148_3357 | Hypothetical protein. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.562 |
EEB79280.1 | EEB78846.1 | GPB2148_2210 | GPB2148_2054 | Hypothetical protein. | Hypothetical protein. | 0.562 |
EEB79984.1 | EEB78256.1 | GPB2148_3833 | GPB2148_882 | Putative rieske (2Fe-2S) domain protein; [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.617 |
EEB79984.1 | EEB78846.1 | GPB2148_3833 | GPB2148_2054 | Putative rieske (2Fe-2S) domain protein; [PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Hypothetical protein. | 0.449 |
EEB80539.1 | EEB78846.1 | GPB2148_3357 | GPB2148_2054 | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Hypothetical protein. | 0.562 |