STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB80286.1Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (268 aa)    
Predicted Functional Partners:
EEB80325.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.786
EEB80259.1
Transcriptional regulator, GntR family protein; [K] COG2188 Transcriptional regulators.
       0.752
EEB80333.1
ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
  
    0.733
EEB80480.1
Hypothetical protein.
       0.732
EEB80411.1
Hypothetical protein.
       0.711
EEB80200.1
Natural resistance-associated macrophage protein; [P] COG1914 Mn2+ and Fe2+ transporters of the NRAMP family.
       0.521
EEB80522.1
Hypothetical protein; [R] COG2346 Truncated hemoglobins.
       0.475
EEB78539.1
Hypothetical protein; [L] COG0419 ATPase involved in DNA repair.
  
     0.461
EEB78733.1
Hypothetical protein.
  
     0.457
engA
Putative GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.442
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.