Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEB80389.1Toluene tolerance protein Ttg2D; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. (218 aa)    
Predicted Functional Partners:
EEB80133.1
Mce related protein; [Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
 0.953
EEB80276.1
ABC transporter, ATP-binding protein, putative; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
  
 
 0.906
EEB78305.1
VacJ like lipoprotein; [M] COG2853 Surface lipoprotein.
   
 
 0.883
EEB80344.1
Conserved domain protein; [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
  
 
 0.842
EEB78440.1
Hypothetical protein; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
 
  
 0.825
EEB80450.1
[M] COG3317 Uncharacterized lipoprotein.
  
    0.718
EEB80091.1
[S] COG3308 Predicted membrane protein.
  
     0.681
lptA
Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
 
  
 0.661
EEB79626.1
Conserved hypothetical protein; [R] COG3313 Predicted Fe-S protein.
  
     0.659
tolA
Protein TolA; [M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
   
 0.658
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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