Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEB80391.1Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (136 aa)    
Predicted Functional Partners:
EEB80308.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.762
pcaC
[S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
  
  0.742
EEB79884.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.737
EEB77183.1
Hypothetical protein; [S] COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase.
  
     0.735
EEB77544.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.727
EEB78033.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.724
dapB_2
Dihydrodipicolinate reductase, N-terminus domain protein; [S] COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase.
  
     0.724
EEB79248.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.721
EEB80193.1
Dihydrodipicolinate reductase, N-terminus domain protein; [E] COG0289 Dihydrodipicolinate reductase.
  
     0.719
EEB80433.1
Conserved domain protein, putative; [R] COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
  
     0.702
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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