STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB77183.1Hypothetical protein; [S] COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase. (353 aa)    
Predicted Functional Partners:
dapB_2
Dihydrodipicolinate reductase, N-terminus domain protein; [S] COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase.
 
  
 
0.924
EEB77146.1
Hypothetical protein.
       0.773
pcaC
[S] COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
  
     0.749
EEB79373.1
Dihydrodipicolinate reductase, N-terminus domain protein; [S] COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase.
  
  
 
0.745
EEB78297.1
Conserved domain protein, putative; [R] COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
  
     0.737
EEB78335.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.737
EEB80391.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.735
EEB77626.1
Transcriptional regulator, TetR family; [K] COG1309 Transcriptional regulator.
  
     0.719
EEB77544.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.699
EEB78408.1
Conserved domain protein, putative; [R] COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
  
     0.695
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.