STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB76836.1ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. (919 aa)    
Predicted Functional Partners:
EEB79072.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
 0.999
EEB78922.1
Putative response regulator recevier domain protein; [T] COG0784 FOG: CheY-like receiver.
  
 0.999
EEB77286.1
Two component regulator three Y motif family; [T] COG0642 Signal transduction histidine kinase.
 
 0.999
EEB80367.1
Response regulator receiver domain protein; [T] COG0642 Signal transduction histidine kinase.
 
0.999
EEB76828.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
 0.999
EEB76839.1
Response regulator receiver domain protein; [T] COG0784 FOG: CheY-like receiver.
 
 0.999
EEB77450.1
Response regulator receiver domain protein; [T] COG0784 FOG: CheY-like receiver.
 
 
 0.995
EEB80100.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0784 FOG: CheY-like receiver.
 
 0.985
EEB77327.1
Cyclic diguanylate phosphodiesterase domain protein; [T] COG2200 FOG: EAL domain.
 
 
 0.978
EEB80093.1
[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.970
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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