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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB77225.1Putative CobQ/CobB/MinD/ParA nucleotide binding domain protein; [D] COG0489 ATPases involved in chromosome partitioning. (298 aa)    
Predicted Functional Partners:
EEB77200.1
ParB-like nuclease domain family protein; [K] COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
 
 0.996
gidB
Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.847
EEB79763.1
[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
  
 0.722
EEB76982.1
TonB-dependent receptor plug domain, putative; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
   0.707
EEB78447.1
TonB-dependent receptor plug domain protein; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
   0.707
EEB79053.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
   0.707
EEB76853.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
   0.707
EEB79265.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
   0.707
EEB80352.1
TonB-dependent receptor plug domain protein; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
   0.707
EEB80024.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
   0.707
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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