STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB79881.1[I] COG1257 Hydroxymethylglutaryl-CoA reductase. (394 aa)    
Predicted Functional Partners:
EEB79639.1
Secretory lipase family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.615
EEB79703.1
Acyl-CoA dehydrogenase, C-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.
       0.566
EEB80020.1
Acyl-CoA dehydrogenase, middle domain protein; [I] COG1960 Acyl-CoA dehydrogenases.
       0.566
EEB76987.1
Polyprenyl synthetase superfamily protein; [H] COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.439
EEB78505.1
Hypothetical protein.
   
  
 0.425
EEB78713.1
Putative FAD binding domain protein; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
   
  
 0.425
EEB78027.1
Tryptophan halogenase superfamily protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
  
 0.425
EEB78110.1
Tryptophan halogenase superfamily protein; [GEPR] COG0477 Permeases of the major facilitator superfamily.
   
  
 0.425
ubiH
[HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
   
  
 0.425
EEB76823.1
Putative FAD binding domain protein; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
   
  
 0.425
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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