STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB77496.1Hypothetical protein; [I] COG1946 Acyl-CoA thioesterase. (262 aa)    
Predicted Functional Partners:
EEB77699.1
Hypothetical protein.
  
     0.614
EEB77668.1
Hypothetical protein.
  
     0.597
EEB77474.1
[S] COG2510 Predicted membrane protein.
  
    0.596
EEB77486.1
Cupin family protein; [S] COG3542 Uncharacterized conserved protein.
       0.592
EEB78207.1
Luciferase-like monooxygenase superfamily protein; [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
  
     0.547
EEB78398.1
Hypothetical protein; [I] COG2030 Acyl dehydratase.
  
 
 0.539
EEB79177.1
Hydrolase, NUDIX family; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.537
EEB78474.1
Putative MaoC like domain protein; [I] COG2030 Acyl dehydratase.
  
 
 0.524
EEB77732.1
Glycosyl transferase, group 1 family; [M] COG0438 Glycosyltransferase.
  
     0.506
EEB77780.1
Methyltransferase, UbiE/COQ5 family; [QR] COG0500 SAM-dependent methyltransferases.
  
     0.473
Your Current Organism:
gamma proteobacterium HTCC2148
NCBI taxonomy Id: 247634
Other names: m. gamma proteobacterium HTCC2148, marine gamma proteobacterium HTCC2148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.