STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD164CD164 molecule. (216 aa)    
Predicted Functional Partners:
NUP155
Nucleoporin 155.
   
 0.862
NUP88
Nucleoporin 88.
    
 0.857
NUP214
Nucleoporin 214.
    
 0.857
SEH1L
SEH1 like nucleoporin.
    
 0.845
NUP107
Nucleoporin 107.
   
 0.835
NUP85
Nucleoporin 85.
   
 0.829
RANGAP1
Ran GTPase activating protein 1.
   
 0.823
SNW1
SNW domain containing 1.
    
 0.819
PRPF19
pre-mRNA processing factor 19.
    
 0.818
MACROH2A1
Core histone macro-H2A.1.
    
  0.815
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.