STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115619215Transcriptional repressor CTCF-like. (728 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
    
  0.858
RAD21
RAD21 cohesin complex component.
   
 0.837
ENSSHBP00005001946
annotation not available
   
 
 0.673
ENSSHBP00005002008
annotation not available
   
 
 0.673
STAG2
Stromal antigen 2.
   
 
 0.673
ENSSHBP00005012348
annotation not available
   
 
 0.647
STAG1
Stromal antigen 1.
   
 
 0.647
EP300
E1A binding protein p300.
   
 0.631
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.590
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.585
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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