STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTBP2C-terminal binding protein 2. (445 aa)    
Predicted Functional Partners:
PSAT1
Phosphoserine aminotransferase 1.
  
 0.963
MECOM
MDS1 and EVI1 complex locus.
    
 0.904
TCF7
Transcription factor 7.
    
 0.874
LEF1
Lymphoid enhancer binding factor 1.
    
 0.873
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.864
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
 0.859
TCF7L1
Transcription factor 7 like 1.
    
 0.857
TCF7L2
Transcription factor 7 like 2.
    
 0.857
HDAC2
Histone deacetylase 2.
   
 0.852
HDAC8
Histone deacetylase 8.
   
 0.852
Your Current Organism:
Strigops habroptila
NCBI taxonomy Id: 2489341
Other names: Kakapo, S. habroptila, Strigops habroptilis, Strigops habroptilus, owl parrot
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